Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5344SMC_N domain-containing protein. (1141 aa)    
Predicted Functional Partners:
ACN38_g7453
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
ACN38_g5752
SP-RING-type domain-containing protein.
    
 0.999
ACN38_g5242
SMC_N domain-containing protein.
   
0.999
ACN38_g7249
RING-type domain-containing protein.
    
 0.999
ACN38_g7726
MAGE domain-containing protein.
   
 0.997
ACN38_g8630
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.981
ACN38_g2488
Uncharacterized protein.
   
 
 0.980
ACN38_g2411
Ubiquitin-like domain-containing protein.
   
 0.977
ACN38_g4225
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
    
 
 0.973
ACN38_g1026
Uncharacterized protein.
   
 
 0.973
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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