Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5330Uncharacterized protein. (832 aa)    
Predicted Functional Partners:
ACN38_g10390
Uncharacterized protein.
    
 0.967
ACN38_g1867
GATA-type domain-containing protein.
    
 0.802
srep
GATA factor.
    
 0.795
ACN38_g7292
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
   
 0.793
ACN38_g4701
Uncharacterized protein.
    
 
 0.793
ACN38_g4606
Velvet domain-containing protein.
    
 
 0.765
ACN38_g3462
Uncharacterized protein.
      
 0.663
ACN38_g12570
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.661
ACN38_g1897
Uncharacterized protein.
   
 0.656
ACN38_g1898
Hist_deacetyl domain-containing protein.
   
 0.656
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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