ACN38_g9239 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g9239

HIT domain-containing protein. (135 aa)

Predicted Functional Partners:

tbp1

0.909

ACN38_g12425

0.843

ACN38_g3660

0.816

ACN38_g6673

0.816

ACN38_g8588

0.797

ACN38_g9006

0.766

ACN38_g9302

0.728

ACN38_g5758

0.712

ACN38_g2508

0.668

ACN38_g3988

0.652

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g12425	ACN38_g8588	A0A0M8NYA2	A0A0N0RYB9	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.615
ACN38_g12425	ACN38_g9239	A0A0M8NYA2	A0A0M8P2F3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	HIT domain-containing protein.	0.843
ACN38_g12425	ACN38_g9302	A0A0M8NYA2	A0A0M8P3C5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	RING-type domain-containing protein.	0.999
ACN38_g12425	tbp1	A0A0M8NYA2	A0A0M9WCG3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	TATA-box-binding protein.	0.971
ACN38_g2508	ACN38_g9239	A0A0M9WIW1	A0A0M8P2F3	Deacetylase sirtuin-type domain-containing protein.	HIT domain-containing protein.	0.668
ACN38_g2508	tbp1	A0A0M9WIW1	A0A0M9WCG3	Deacetylase sirtuin-type domain-containing protein.	TATA-box-binding protein.	0.436
ACN38_g3660	ACN38_g6673	A0A0M8PCP5	A0A0N0RYU2	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	Uncharacterized protein.	0.992
ACN38_g3660	ACN38_g9239	A0A0M8PCP5	A0A0M8P2F3	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	HIT domain-containing protein.	0.816
ACN38_g3988	ACN38_g9239	A0A0M8P4S1	A0A0M8P2F3	Uncharacterized protein.	HIT domain-containing protein.	0.652
ACN38_g5758	ACN38_g9239	A0A0M8P132	A0A0M8P2F3	AA_TRNA_LIGASE_II domain-containing protein.	HIT domain-containing protein.	0.712
ACN38_g6673	ACN38_g3660	A0A0N0RYU2	A0A0M8PCP5	Uncharacterized protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.992
ACN38_g6673	ACN38_g9239	A0A0N0RYU2	A0A0M8P2F3	Uncharacterized protein.	HIT domain-containing protein.	0.816
ACN38_g8588	ACN38_g12425	A0A0N0RYB9	A0A0M8NYA2	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.615
ACN38_g8588	ACN38_g9239	A0A0N0RYB9	A0A0M8P2F3	Uncharacterized protein.	HIT domain-containing protein.	0.797
ACN38_g8588	ACN38_g9302	A0A0N0RYB9	A0A0M8P3C5	Uncharacterized protein.	RING-type domain-containing protein.	0.614
ACN38_g8588	tbp1	A0A0N0RYB9	A0A0M9WCG3	Uncharacterized protein.	TATA-box-binding protein.	0.919
ACN38_g9006	ACN38_g9239	A0A0N0RY63	A0A0M8P2F3	Uncharacterized protein.	HIT domain-containing protein.	0.766
ACN38_g9239	ACN38_g12425	A0A0M8P2F3	A0A0M8NYA2	HIT domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.843
ACN38_g9239	ACN38_g2508	A0A0M8P2F3	A0A0M9WIW1	HIT domain-containing protein.	Deacetylase sirtuin-type domain-containing protein.	0.668
ACN38_g9239	ACN38_g3660	A0A0M8P2F3	A0A0M8PCP5	HIT domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.816