Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACN38_g9954Ribosomal_L7Ae domain-containing protein. (224 aa)    
Predicted Functional Partners:
ACN38_g12941
PUA domain-containing protein.
  
 0.999
ACN38_g7232
Uncharacterized protein.
   
 0.999
ACN38_g6069
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
   
 0.999
ACN38_g6734
Uncharacterized protein.
   
 0.998
ACN38_g6175
Nop domain-containing protein.
  
 0.994
ACN38_g10086
Nop domain-containing protein.
   
 0.993
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.989
ACN38_g9742
Uncharacterized protein.
   
 
 0.989
ACN38_g1700
TruB_N domain-containing protein.
  
 0.988
ACN38_g724
KH domain-containing protein.
   
 
 0.983
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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