Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g8839Uncharacterized protein. (305 aa)    
Predicted Functional Partners:
ACN38_g6702
Ribosomal_L2_C domain-containing protein.
  
 0.957
ACN38_g7723
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.956
ACN38_g9368
Ribosomal_L23eN domain-containing protein.
  
 0.955
ACN38_g3650
Ribosomal_L18_c domain-containing protein.
  
 0.955
ACN38_g1203
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.955
rpl3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.953
ACN38_g1951
Uncharacterized protein.
  
 0.952
ACN38_g6405
Ribosomal_L19e domain-containing protein.
  
 0.951
ACN38_g3174
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.949
ACN38_g6368
Uncharacterized protein.
  
 0.948
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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