Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACN38_g8748Zn(2)-C6 fungal-type domain-containing protein. (474 aa)    
Predicted Functional Partners:
ACN38_g8428
Ornithine aminotransferase.
  
 0.927
ACN38_g3001
Uncharacterized protein.
  
 0.927
ACN38_g10320
Ornithine aminotransferase.
  
 0.927
ACN38_g4431
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.904
ACN38_g12060
Uncharacterized protein.
    
 0.889
ACN38_g12061
Uncharacterized protein.
    
 0.889
ACN38_g12718
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
  
 
 0.865
ACN38_g1616
Uncharacterized protein.
     
 0.860
ACN38_g10394
Uncharacterized protein.
    
   0.818
ACN38_g5368
Uncharacterized protein.
  
 
 0.818
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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