Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g9678Uncharacterized protein. (416 aa)    
Predicted Functional Partners:
ACN38_g765
WD_REPEATS_REGION domain-containing protein.
    
 0.997
ACN38_g8637
PHD-type domain-containing protein.
    
 0.964
ACN38_g8537
Uncharacterized protein.
    
 0.964
ACN38_g12570
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.950
ACN38_g6577
Hist_deacetyl domain-containing protein.
   
 0.950
ACN38_g2237
ENDO3c domain-containing protein.
    
 0.949
ACN38_g2411
Ubiquitin-like domain-containing protein.
   
 0.796
ACN38_g1137
Uncharacterized protein.
   
 0.768
ACN38_g7343
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.743
ACN38_g5173
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.743
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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