ACN38_g8255 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g8255

SWIRM domain-containing protein. (385 aa)

Predicted Functional Partners:

ACN38_g4912

0.872

ACN38_g11869

0.821

ACN38_g1381

0.815

ACN38_g1357

0.815

ACN38_g8728

0.789

ACN38_g5223

0.789

ACN38_g6120

0.789

ACN38_g951

0.789

ACN38_g9354

0.714

ACN38_g8443

0.675

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g11869	ACN38_g8255	A0A0M9WAC8	A0A0M8P418	DUF3591 domain-containing protein.	SWIRM domain-containing protein.	0.821
ACN38_g11869	ACN38_g8443	A0A0M9WAC8	A0A0M8P4T2	DUF3591 domain-containing protein.	Uncharacterized protein.	0.998
ACN38_g1357	ACN38_g8255	A0A0M9WJX2	A0A0M8P418	HDAC_interact domain-containing protein.	SWIRM domain-containing protein.	0.815
ACN38_g1381	ACN38_g8255	A0A0M8PHC6	A0A0M8P418	FAS1 domain-containing protein.	SWIRM domain-containing protein.	0.815
ACN38_g4912	ACN38_g8255	A0A0M9WGN8	A0A0M8P418	Importin N-terminal domain-containing protein.	SWIRM domain-containing protein.	0.872
ACN38_g5223	ACN38_g6120	A0A0M8PAN7	A0A0N0RYS8	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.670
ACN38_g5223	ACN38_g8255	A0A0M8PAN7	A0A0M8P418	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	SWIRM domain-containing protein.	0.789
ACN38_g5223	ACN38_g8728	A0A0M8PAN7	A0A0M8P4D6	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.670
ACN38_g5223	ACN38_g9354	A0A0M8PAN7	A0A0M8NVS4	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.	0.670
ACN38_g5223	ACN38_g951	A0A0M8PAN7	A0A0N0RZZ5	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.973
ACN38_g6120	ACN38_g5223	A0A0N0RYS8	A0A0M8PAN7	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.670
ACN38_g6120	ACN38_g8255	A0A0N0RYS8	A0A0M8P418	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	SWIRM domain-containing protein.	0.789
ACN38_g6120	ACN38_g9354	A0A0N0RYS8	A0A0M8NVS4	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.	0.676
ACN38_g6120	ACN38_g951	A0A0N0RYS8	A0A0N0RZZ5	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.468
ACN38_g8255	ACN38_g11869	A0A0M8P418	A0A0M9WAC8	SWIRM domain-containing protein.	DUF3591 domain-containing protein.	0.821
ACN38_g8255	ACN38_g1357	A0A0M8P418	A0A0M9WJX2	SWIRM domain-containing protein.	HDAC_interact domain-containing protein.	0.815
ACN38_g8255	ACN38_g1381	A0A0M8P418	A0A0M8PHC6	SWIRM domain-containing protein.	FAS1 domain-containing protein.	0.815
ACN38_g8255	ACN38_g4912	A0A0M8P418	A0A0M9WGN8	SWIRM domain-containing protein.	Importin N-terminal domain-containing protein.	0.872
ACN38_g8255	ACN38_g5223	A0A0M8P418	A0A0M8PAN7	SWIRM domain-containing protein.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.789
ACN38_g8255	ACN38_g6120	A0A0M8P418	A0A0N0RYS8	SWIRM domain-containing protein.	Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.	0.789