Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g9158Uncharacterized protein. (463 aa)    
Predicted Functional Partners:
ACN38_g3547
Tr-type G domain-containing protein.
    
 
 0.979
ACN38_g6547
JAB_MPN domain-containing protein.
    
 
 0.974
ACN38_g10343
GYF domain-containing protein.
   
 
 0.962
ACN38_g5485
Uncharacterized protein.
    
 
 0.962
ACN38_g10657
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.938
ACN38_g4401
Uncharacterized protein.
   
   0.925
ACN38_g9954
Ribosomal_L7Ae domain-containing protein.
    
 
 0.921
ACN38_g11323
Uncharacterized protein.
    
 
 0.914
ACN38_g8285
WD_REPEATS_REGION domain-containing protein.
    
 
 0.912
ACN38_g2540
TPR_REGION domain-containing protein.
  
 
   0.874
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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