Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g3934Uncharacterized protein. (850 aa)    
Predicted Functional Partners:
ACN38_g4289
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.969
ACN38_g6394
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.968
ACN38_g11329
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.968
ACN38_g8376
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 0.949
ACN38_g1385
Uncharacterized protein.
  
 
 0.943
ACN38_g8308
Iso_dh domain-containing protein.
  
 0.937
ACN38_g11436
Uncharacterized protein.
  
 
 0.927
ACN38_g2109
DAO domain-containing protein.
  
 0.927
ACN38_g9530
DAO domain-containing protein.
  
 0.927
ACN38_g835
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.924
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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