ACN38_g3550 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g3550

Zn(2)-C6 fungal-type domain-containing protein. (835 aa)

Predicted Functional Partners:

ACN38_g5937

0.719

ACN38_g5103

0.719

ACN38_g10433

0.719

ACN38_g2397

0.642

ACN38_g8266

0.633

ACN38_g11390

0.633

ACN38_g7244

0.618

ACN38_g8596

0.618

actA

0.618

ACN38_g9733

0.618

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g10433	ACN38_g3550	A0A0M9WBL9	A0A0M8P504	PhoD_N domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.719
ACN38_g11390	ACN38_g3550	A0A0N0RXM6	A0A0M8P504	Uncharacterized protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.633
ACN38_g2397	ACN38_g3550	A0A0N0RZN4	A0A0M8P504	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Zn(2)-C6 fungal-type domain-containing protein.	0.642
ACN38_g2397	ACN38_g7244	A0A0N0RZN4	A0A0M8NZ57	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Uncharacterized protein; Belongs to the actin family.	0.429
ACN38_g2397	ACN38_g8596	A0A0N0RZN4	A0A0M8NZN8	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Uncharacterized protein; Belongs to the actin family.	0.419
ACN38_g2397	ACN38_g9733	A0A0N0RZN4	A0A0M9WCA5	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Uncharacterized protein.	0.413
ACN38_g2397	actA	A0A0N0RZN4	A0A0M8P359	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	Actin.	0.421
ACN38_g3550	ACN38_g10433	A0A0M8P504	A0A0M9WBL9	Zn(2)-C6 fungal-type domain-containing protein.	PhoD_N domain-containing protein.	0.719
ACN38_g3550	ACN38_g11390	A0A0M8P504	A0A0N0RXM6	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.633
ACN38_g3550	ACN38_g2397	A0A0M8P504	A0A0N0RZN4	Zn(2)-C6 fungal-type domain-containing protein.	Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.	0.642
ACN38_g3550	ACN38_g5103	A0A0M8P504	A0A0M8PB08	Zn(2)-C6 fungal-type domain-containing protein.	E3 ubiquitin-protein ligase.	0.719
ACN38_g3550	ACN38_g5937	A0A0M8P504	A0A0M8P9J9	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.719
ACN38_g3550	ACN38_g7244	A0A0M8P504	A0A0M8NZ57	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.618
ACN38_g3550	ACN38_g8266	A0A0M8P504	A0A0M8NXI2	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.633
ACN38_g3550	ACN38_g8596	A0A0M8P504	A0A0M8NZN8	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.618
ACN38_g3550	ACN38_g9733	A0A0M8P504	A0A0M9WCA5	Zn(2)-C6 fungal-type domain-containing protein.	Uncharacterized protein.	0.618
ACN38_g3550	actA	A0A0M8P504	A0A0M8P359	Zn(2)-C6 fungal-type domain-containing protein.	Actin.	0.618
ACN38_g5103	ACN38_g3550	A0A0M8PB08	A0A0M8P504	E3 ubiquitin-protein ligase.	Zn(2)-C6 fungal-type domain-containing protein.	0.719
ACN38_g5103	ACN38_g8596	A0A0M8PB08	A0A0M8NZN8	E3 ubiquitin-protein ligase.	Uncharacterized protein; Belongs to the actin family.	0.429
ACN38_g5103	actA	A0A0M8PB08	A0A0M8P359	E3 ubiquitin-protein ligase.	Actin.	0.429