ACN38_g8234 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g8234

CAP-Gly domain-containing protein. (278 aa)

Predicted Functional Partners:

ACN38_g10167

0.959

ACN38_g3801

0.891

ACN38_g7850

0.839

ACN38_g220

0.839

ACN38_g1429

0.780

tubA

0.732

ACN38_g4240

0.732

ACN38_g9088

0.664

ACN38_g3900

0.526

ACN38_g4259

0.525

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g10167	ACN38_g1429	A0A0M8NUF1	A0A0M8P8Z6	CAP-Gly domain-containing protein.	GH16 domain-containing protein.	0.911
ACN38_g10167	ACN38_g220	A0A0M8NUF1	A0A0M9WKZ5	CAP-Gly domain-containing protein.	TFCD_C domain-containing protein.	0.963
ACN38_g10167	ACN38_g3801	A0A0M8NUF1	A0A0M8P507	CAP-Gly domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.978
ACN38_g10167	ACN38_g3900	A0A0M8NUF1	A0A0M9WHK3	CAP-Gly domain-containing protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.967
ACN38_g10167	ACN38_g4240	A0A0M8NUF1	A0A0M8PBN6	CAP-Gly domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.889
ACN38_g10167	ACN38_g7850	A0A0M8NUF1	A0A0M8NXE1	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.963
ACN38_g10167	ACN38_g8234	A0A0M8NUF1	A0A0M8P561	CAP-Gly domain-containing protein.	CAP-Gly domain-containing protein.	0.959
ACN38_g10167	ACN38_g9088	A0A0M8NUF1	A0A0M8P3S0	CAP-Gly domain-containing protein.	C-CAP/cofactor C-like domain-containing protein.	0.896
ACN38_g10167	tubA	A0A0M8NUF1	A0A0M8NWZ0	CAP-Gly domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.889
ACN38_g1429	ACN38_g10167	A0A0M8P8Z6	A0A0M8NUF1	GH16 domain-containing protein.	CAP-Gly domain-containing protein.	0.911
ACN38_g1429	ACN38_g3801	A0A0M8P8Z6	A0A0M8P507	GH16 domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.900
ACN38_g1429	ACN38_g3900	A0A0M8P8Z6	A0A0M9WHK3	GH16 domain-containing protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.736
ACN38_g1429	ACN38_g4240	A0A0M8P8Z6	A0A0M8PBN6	GH16 domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.690
ACN38_g1429	ACN38_g8234	A0A0M8P8Z6	A0A0M8P561	GH16 domain-containing protein.	CAP-Gly domain-containing protein.	0.780
ACN38_g1429	ACN38_g9088	A0A0M8P8Z6	A0A0M8P3S0	GH16 domain-containing protein.	C-CAP/cofactor C-like domain-containing protein.	0.752
ACN38_g1429	tubA	A0A0M8P8Z6	A0A0M8NWZ0	GH16 domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.	0.690
ACN38_g220	ACN38_g10167	A0A0M9WKZ5	A0A0M8NUF1	TFCD_C domain-containing protein.	CAP-Gly domain-containing protein.	0.963
ACN38_g220	ACN38_g3801	A0A0M9WKZ5	A0A0M8P507	TFCD_C domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.962
ACN38_g220	ACN38_g3900	A0A0M9WKZ5	A0A0M9WHK3	TFCD_C domain-containing protein.	Tubulin-specific chaperone A; Belongs to the TBCA family.	0.736
ACN38_g220	ACN38_g4240	A0A0M9WKZ5	A0A0M8PBN6	TFCD_C domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.752