Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g3059Uncharacterized protein. (492 aa)    
Predicted Functional Partners:
ACN38_g8686
Uncharacterized protein.
    
 0.831
ACN38_g2527
Uncharacterized protein.
    
 0.781
ACN38_g7719
SWIB domain-containing protein.
    
 0.780
ACN38_g668
Uncharacterized protein; Belongs to the actin family.
    
 0.780
ACN38_g3866
Uncharacterized protein.
  
 
 0.762
ACN38_g1777
Uncharacterized protein.
    
 0.657
ACN38_g10359
WW domain-containing protein.
   
 0.653
ACN38_g5313
Uncharacterized protein.
   
 0.653
ACN38_g7147
ARID domain-containing protein.
  
 
 
 0.623
ACN38_g5380
Uncharacterized protein.
    
 0.615
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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