Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g2376CRAL-TRIO domain-containing protein. (360 aa)    
Predicted Functional Partners:
ACN38_g3842
CRAL-TRIO domain-containing protein.
    
 
 0.723
ACN38_g5070
CTP_transf_like domain-containing protein.
    
 
 0.683
ACN38_g457
Uncharacterized protein.
     
 0.657
ACN38_g6913
SAC domain-containing protein.
    
 
 0.649
ACN38_g3662
Uncharacterized protein.
    
   0.619
ACN38_g1649
CRAL-TRIO domain-containing protein.
    
 
 0.603
ACN38_g13014
Uncharacterized protein.
   
 
  0.578
ACN38_g10421
Uncharacterized protein.
     
 0.573
ACN38_g5582
Uncharacterized protein.
    
   0.560
ACN38_g1954
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 
 0.556
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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