Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACN38_g3945Zn(2)-C6 fungal-type domain-containing protein. (1127 aa)    
Predicted Functional Partners:
ACN38_g5729
RFX-type winged-helix domain-containing protein.
    
 
 0.641
ACN38_g5355
Histone H2A; Belongs to the histone H2A family.
    
  0.623
ACN38_g7244
Uncharacterized protein; Belongs to the actin family.
   
 
 0.616
ACN38_g5357
Histone H2B; Belongs to the histone H2B family.
    
  0.605
ACN38_g6202
AAA domain-containing protein.
    
  0.591
ACN38_g3096
RFX-type winged-helix domain-containing protein.
    
   0.584
ACN38_g9575
Uncharacterized protein.
    
 0.577
atg1
Serine/threonine-protein kinase.
    
  0.577
ACN38_g7343
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.571
ACN38_g5173
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.571
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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