STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g6317RRM domain-containing protein. (275 aa)    
Predicted Functional Partners:
ACN38_g9269
Uncharacterized protein.
   
 0.996
ACN38_g7120
FHA domain-containing protein.
   
 0.996
ACN38_g6060
Uncharacterized protein.
    
 
 0.987
ACN38_g10545
SF3b1 domain-containing protein.
    
 
 0.986
ACN38_g12366
PSP domain-containing protein.
    
 
 0.984
ACN38_g598
Uncharacterized protein.
    
 
 0.983
ACN38_g11545
CPSF_A domain-containing protein.
    
 
 0.983
ACN38_g9462
Uncharacterized protein.
    
 
 0.982
ACN38_g5485
Uncharacterized protein.
    
 
 0.980
ACN38_g9704
Uncharacterized protein.
    
   0.977
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.