ACN38_g1613 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g1613

AAA domain-containing protein; Belongs to the AAA ATPase family. (439 aa)

Predicted Functional Partners:

ACN38_g12076

0.999

ACN38_g7143

0.999

ACN38_g6578

0.999

ACN38_g7718

0.999

ACN38_g4258

0.999

ACN38_g5738

0.999

ACN38_g4026

0.999

ACN38_g873

0.999

ACN38_g4479

0.999

ACN38_g935

0.999

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g12076	ACN38_g1613	A0A0M8NRB7	A0A0M8P8F5	Ubiquitin carboxyl-terminal hydrolase.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
ACN38_g12076	ACN38_g4026	A0A0M8NRB7	A0A0M8P7D1	Ubiquitin carboxyl-terminal hydrolase.	PCI domain-containing protein.	0.999
ACN38_g12076	ACN38_g4258	A0A0M8NRB7	A0A0M8P4A6	Ubiquitin carboxyl-terminal hydrolase.	VWFA domain-containing protein.	0.992
ACN38_g12076	ACN38_g4479	A0A0M8NRB7	A0A0M8PB97	Ubiquitin carboxyl-terminal hydrolase.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.996
ACN38_g12076	ACN38_g5738	A0A0M8NRB7	A0A0M8P4H0	Ubiquitin carboxyl-terminal hydrolase.	PCI domain-containing protein.	0.998
ACN38_g12076	ACN38_g6578	A0A0M8NRB7	A0A0M8NZQ8	Ubiquitin carboxyl-terminal hydrolase.	MPN domain-containing protein.	0.999
ACN38_g12076	ACN38_g7143	A0A0M8NRB7	A0A0M8NYS2	Ubiquitin carboxyl-terminal hydrolase.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.998
ACN38_g12076	ACN38_g7718	A0A0M8NRB7	A0A0M8P150	Ubiquitin carboxyl-terminal hydrolase.	PCI domain-containing protein.	0.998
ACN38_g12076	ACN38_g873	A0A0M8NRB7	A0A0M8P9X6	Ubiquitin carboxyl-terminal hydrolase.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.997
ACN38_g12076	ACN38_g935	A0A0M8NRB7	A0A0M8PCJ7	Ubiquitin carboxyl-terminal hydrolase.	Proteasome subunit alpha type.	0.986
ACN38_g1613	ACN38_g12076	A0A0M8P8F5	A0A0M8NRB7	AAA domain-containing protein; Belongs to the AAA ATPase family.	Ubiquitin carboxyl-terminal hydrolase.	0.999
ACN38_g1613	ACN38_g4026	A0A0M8P8F5	A0A0M8P7D1	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
ACN38_g1613	ACN38_g4258	A0A0M8P8F5	A0A0M8P4A6	AAA domain-containing protein; Belongs to the AAA ATPase family.	VWFA domain-containing protein.	0.999
ACN38_g1613	ACN38_g4479	A0A0M8P8F5	A0A0M8PB97	AAA domain-containing protein; Belongs to the AAA ATPase family.	26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
ACN38_g1613	ACN38_g5738	A0A0M8P8F5	A0A0M8P4H0	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
ACN38_g1613	ACN38_g6578	A0A0M8P8F5	A0A0M8NZQ8	AAA domain-containing protein; Belongs to the AAA ATPase family.	MPN domain-containing protein.	0.999
ACN38_g1613	ACN38_g7143	A0A0M8P8F5	A0A0M8NYS2	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
ACN38_g1613	ACN38_g7718	A0A0M8P8F5	A0A0M8P150	AAA domain-containing protein; Belongs to the AAA ATPase family.	PCI domain-containing protein.	0.999
ACN38_g1613	ACN38_g873	A0A0M8P8F5	A0A0M8P9X6	AAA domain-containing protein; Belongs to the AAA ATPase family.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.999
ACN38_g1613	ACN38_g935	A0A0M8P8F5	A0A0M8PCJ7	AAA domain-containing protein; Belongs to the AAA ATPase family.	Proteasome subunit alpha type.	0.999