ACN38_g2972 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g2972

Uncharacterized protein. (372 aa)

Predicted Functional Partners:

ACN38_g275

0.722

ACN38_g5491

0.575

ACN38_g9231

0.549

ACN38_g5337

0.532

ACN38_g11998

0.515

ACN38_g6147

0.514

ACN38_g2508

0.513

ACN38_g8776

0.508

ACN38_g619

0.508

ACN38_g2939

0.507

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g11998	ACN38_g2508	A0A0M8NTY2	A0A0M9WIW1	Importin subunit alpha; Belongs to the importin alpha family.	Deacetylase sirtuin-type domain-containing protein.	0.416
ACN38_g11998	ACN38_g275	A0A0M8NTY2	A0A0M8PJ49	Importin subunit alpha; Belongs to the importin alpha family.	Uncharacterized protein.	0.537
ACN38_g11998	ACN38_g2972	A0A0M8NTY2	A0A0M8P926	Importin subunit alpha; Belongs to the importin alpha family.	Uncharacterized protein.	0.515
ACN38_g2508	ACN38_g11998	A0A0M9WIW1	A0A0M8NTY2	Deacetylase sirtuin-type domain-containing protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.416
ACN38_g2508	ACN38_g275	A0A0M9WIW1	A0A0M8PJ49	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.622
ACN38_g2508	ACN38_g2972	A0A0M9WIW1	A0A0M8P926	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.513
ACN38_g2508	ACN38_g5491	A0A0M9WIW1	A0A0M8P8T7	Deacetylase sirtuin-type domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.839
ACN38_g2508	ACN38_g619	A0A0M9WIW1	A0A0M8PD28	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.736
ACN38_g275	ACN38_g11998	A0A0M8PJ49	A0A0M8NTY2	Uncharacterized protein.	Importin subunit alpha; Belongs to the importin alpha family.	0.537
ACN38_g275	ACN38_g2508	A0A0M8PJ49	A0A0M9WIW1	Uncharacterized protein.	Deacetylase sirtuin-type domain-containing protein.	0.622
ACN38_g275	ACN38_g2939	A0A0M8PJ49	A0A0N0RZK2	Uncharacterized protein.	Uncharacterized protein.	0.507
ACN38_g275	ACN38_g2972	A0A0M8PJ49	A0A0M8P926	Uncharacterized protein.	Uncharacterized protein.	0.722
ACN38_g275	ACN38_g5337	A0A0M8PJ49	A0A0M9WGG1	Uncharacterized protein.	Uncharacterized protein.	0.532
ACN38_g275	ACN38_g5491	A0A0M8PJ49	A0A0M8P8T7	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.575
ACN38_g275	ACN38_g6147	A0A0M8PJ49	A0A0M9WFK7	Uncharacterized protein.	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.	0.514
ACN38_g275	ACN38_g619	A0A0M8PJ49	A0A0M8PD28	Uncharacterized protein.	Uncharacterized protein.	0.606
ACN38_g275	ACN38_g8776	A0A0M8PJ49	A0A0M8P496	Uncharacterized protein.	Glutamine amidotransferase type-1 domain-containing protein.	0.445
ACN38_g275	ACN38_g9231	A0A0M8PJ49	A0A0N0RY38	Uncharacterized protein.	Rhomboid domain-containing protein.	0.549
ACN38_g2939	ACN38_g275	A0A0N0RZK2	A0A0M8PJ49	Uncharacterized protein.	Uncharacterized protein.	0.507
ACN38_g2939	ACN38_g2972	A0A0N0RZK2	A0A0M8P926	Uncharacterized protein.	Uncharacterized protein.	0.507