ACN38_g2775 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g2775

Uncharacterized protein. (470 aa)

Predicted Functional Partners:

ACN38_g4933

0.556

ACN38_g1497

0.543

ACN38_g2607

0.531

ACN38_g8888

0.512

ACN38_g4652

0.500

ACN38_g1616

0.497

ACN38_g3309

0.497

ACN38_g5907

0.497

ACN38_g5106

0.497

ACN38_g4431

0.497

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g1497	ACN38_g2775	A0A0M9WJR9	A0A0M8P9C4	3'-5' exonuclease domain-containing protein.	Uncharacterized protein.	0.543
ACN38_g1616	ACN38_g2607	A0A0M8P8Q2	A0A0M8P9P3	Uncharacterized protein.	Uncharacterized protein.	0.998
ACN38_g1616	ACN38_g2775	A0A0M8P8Q2	A0A0M8P9C4	Uncharacterized protein.	Uncharacterized protein.	0.497
ACN38_g1616	ACN38_g3309	A0A0M8P8Q2	A0A0M8PCC4	Uncharacterized protein.	Uncharacterized protein.	0.469
ACN38_g1616	ACN38_g4431	A0A0M8P8Q2	A0A0M9WH38	Uncharacterized protein.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.908
ACN38_g1616	ACN38_g4652	A0A0M8P8Q2	A0A0N0RZ93	Uncharacterized protein.	Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.	0.980
ACN38_g1616	ACN38_g5106	A0A0M8P8Q2	A0A0M9WGJ8	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.516
ACN38_g1616	ACN38_g8888	A0A0M8P8Q2	A0A0M8P4J3	Uncharacterized protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.436
ACN38_g2607	ACN38_g1616	A0A0M8P9P3	A0A0M8P8Q2	Uncharacterized protein.	Uncharacterized protein.	0.998
ACN38_g2607	ACN38_g2775	A0A0M8P9P3	A0A0M8P9C4	Uncharacterized protein.	Uncharacterized protein.	0.531
ACN38_g2607	ACN38_g3309	A0A0M8P9P3	A0A0M8PCC4	Uncharacterized protein.	Uncharacterized protein.	0.469
ACN38_g2607	ACN38_g4431	A0A0M8P9P3	A0A0M9WH38	Uncharacterized protein.	Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.997
ACN38_g2607	ACN38_g4652	A0A0M8P9P3	A0A0N0RZ93	Uncharacterized protein.	Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.	0.958
ACN38_g2607	ACN38_g4933	A0A0M8P9P3	A0A0M8P2M1	Uncharacterized protein.	NADPH:adrenodoxin oxidoreductase, mitochondrial.	0.619
ACN38_g2607	ACN38_g5106	A0A0M8P9P3	A0A0M9WGJ8	Uncharacterized protein.	Aminotran_5 domain-containing protein.	0.532
ACN38_g2607	ACN38_g8888	A0A0M8P9P3	A0A0M8P4J3	Uncharacterized protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.812
ACN38_g2775	ACN38_g1497	A0A0M8P9C4	A0A0M9WJR9	Uncharacterized protein.	3'-5' exonuclease domain-containing protein.	0.543
ACN38_g2775	ACN38_g1616	A0A0M8P9C4	A0A0M8P8Q2	Uncharacterized protein.	Uncharacterized protein.	0.497
ACN38_g2775	ACN38_g2607	A0A0M8P9C4	A0A0M8P9P3	Uncharacterized protein.	Uncharacterized protein.	0.531
ACN38_g2775	ACN38_g3309	A0A0M8P9C4	A0A0M8PCC4	Uncharacterized protein.	Uncharacterized protein.	0.497