Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g1115Uncharacterized protein; Belongs to the DapA family. (325 aa)    
Predicted Functional Partners:
ACN38_g1505
MR_MLE domain-containing protein.
   
 0.950
ACN38_g5106
Aminotran_5 domain-containing protein.
   
 
 0.879
ACN38_g8712
Aspartate aminotransferase.
   
 0.874
ACN38_g367
Malate synthase; Belongs to the malate synthase family.
    
 0.863
ACN38_g7852
DAO domain-containing protein.
   
 
  0.855
ACN38_g4963
Uncharacterized protein.
     
  0.849
ACN38_g8546
Isocitrate lyase.
     
  0.840
ACN38_g11903
Uncharacterized protein.
   
  0.823
ACN38_g6824
Aminotran_1_2 domain-containing protein.
   
  0.820
ACN38_g8336
Aspartate aminotransferase.
   
  0.820
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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