ACN38_g2804 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g2804

Uncharacterized protein. (863 aa)

Predicted Functional Partners:

ACN38_g8114

0.577

ACN38_g9119

0.562

ACN38_g8020

0.556

ACN38_g2267

0.554

ACN38_g8859

0.543

ACN38_g3648

0.540

ACN38_g12060

0.538

ACN38_g12061

0.538

ACN38_g9733

0.534

ACN38_g2037

0.533

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g12060	ACN38_g12061	A0A0M8NYU8	A0A0M9WA65	Uncharacterized protein.	Uncharacterized protein.	0.979
ACN38_g12060	ACN38_g2037	A0A0M8NYU8	A0A0M8PEL5	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.510
ACN38_g12060	ACN38_g2804	A0A0M8NYU8	A0A0M8P9E5	Uncharacterized protein.	Uncharacterized protein.	0.538
ACN38_g12061	ACN38_g12060	A0A0M9WA65	A0A0M8NYU8	Uncharacterized protein.	Uncharacterized protein.	0.979
ACN38_g12061	ACN38_g2037	A0A0M9WA65	A0A0M8PEL5	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.510
ACN38_g12061	ACN38_g2804	A0A0M9WA65	A0A0M8P9E5	Uncharacterized protein.	Uncharacterized protein.	0.538
ACN38_g2037	ACN38_g12060	A0A0M8PEL5	A0A0M8NYU8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.510
ACN38_g2037	ACN38_g12061	A0A0M8PEL5	A0A0M9WA65	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.510
ACN38_g2037	ACN38_g2804	A0A0M8PEL5	A0A0M8P9E5	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.533
ACN38_g2037	ACN38_g3648	A0A0M8PEL5	A0A0M8PBV9	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.418
ACN38_g2037	ACN38_g8020	A0A0M8PEL5	A0A0M9WDV8	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	DUF4050 domain-containing protein.	0.486
ACN38_g2267	ACN38_g2804	A0A0M9WJ33	A0A0M8P9E5	Uncharacterized protein.	Uncharacterized protein.	0.554
ACN38_g2267	ACN38_g3648	A0A0M9WJ33	A0A0M8PBV9	Uncharacterized protein.	Uncharacterized protein.	0.545
ACN38_g2267	ACN38_g8020	A0A0M9WJ33	A0A0M9WDV8	Uncharacterized protein.	DUF4050 domain-containing protein.	0.431
ACN38_g2267	ACN38_g8114	A0A0M9WJ33	A0A0M9WDS3	Uncharacterized protein.	Uncharacterized protein.	0.540
ACN38_g2267	ACN38_g8859	A0A0M9WJ33	A0A0M8NZ67	Uncharacterized protein.	Uncharacterized protein.	0.701
ACN38_g2267	ACN38_g9119	A0A0M9WJ33	A0A0M9WCV5	Uncharacterized protein.	Uncharacterized protein.	0.540
ACN38_g2267	ACN38_g9733	A0A0M9WJ33	A0A0M9WCA5	Uncharacterized protein.	Uncharacterized protein.	0.577
ACN38_g2804	ACN38_g12060	A0A0M8P9E5	A0A0M8NYU8	Uncharacterized protein.	Uncharacterized protein.	0.538
ACN38_g2804	ACN38_g12061	A0A0M8P9E5	A0A0M9WA65	Uncharacterized protein.	Uncharacterized protein.	0.538