Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g897PRA1 family protein. (172 aa)    
Predicted Functional Partners:
ACN38_g404
Uncharacterized protein.
   
 
 0.936
ACN38_g10661
Uncharacterized protein.
   
 
 0.882
ACN38_g7102
Uncharacterized protein.
    
 0.855
ACN38_g2849
Uncharacterized protein.
    
 0.852
ACN38_g5855
LisH domain-containing protein.
    
 0.846
ACN38_g2126
PUM-HD domain-containing protein.
    
   0.804
ACN38_g8626
Reticulon-like protein.
    
   0.788
ACN38_g3851
Protein YOP1.
   
   0.776
ACN38_g2399
Uncharacterized protein.
    
 0.746
ACN38_g5337
Uncharacterized protein.
   
 
 0.731
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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