Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5535Uncharacterized protein. (415 aa)    
Predicted Functional Partners:
ACN38_g3640
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.932
ACN38_g3524
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.932
ACN38_g5603
RING-type domain-containing protein.
    
 0.881
ACN38_g1412
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.836
ACN38_g2526
Uncharacterized protein.
    
 
 0.745
ACN38_g11327
Uncharacterized protein.
     
  0.726
ACN38_g8961
Phosphatase tensin-type domain-containing protein.
   
 
 0.665
ACN38_g12412
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
  0.663
ACN38_g1613
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
  0.661
ACN38_g11377
Uncharacterized protein.
     
  0.656
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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