STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5778UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (167 aa)    
Predicted Functional Partners:
ACN38_g2866
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
    
 0.967
ACN38_g10663
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
0.953
ACN38_g1105
RING-type domain-containing protein.
    
 
 0.947
ACN38_g1382
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
    
 
 0.942
ACN38_g9153
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
   0.932
ACN38_g10414
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
 
0.897
ACN38_g6713
UBX domain-containing protein.
   
 
 0.895
ACN38_g5166
Uncharacterized protein.
    
 
 0.884
ACN38_g10413
Uncharacterized protein.
 
  
 0.866
ACN38_g6987
Uncharacterized protein.
    
 
 0.865
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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