Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5694Uncharacterized protein. (261 aa)    
Predicted Functional Partners:
ACN38_g1026
Uncharacterized protein.
    
 0.672
ACN38_g8331
ERCC4 domain-containing protein.
    
  0.578
ACN38_g8330
Uncharacterized protein.
    
  0.578
ACN38_g10524
Ribonuclease P protein subunit.
   
  0.571
ACN38_g12081
Uncharacterized protein.
    
  0.559
ACN38_g7190
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
    
  0.559
ACN38_g5490
Uncharacterized protein.
    
  0.559
ACN38_g5249
Uncharacterized protein.
    
  0.558
ACN38_g564
Uncharacterized protein.
    
 0.550
ACN38_g148
Kri1_C domain-containing protein.
    
  0.548
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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