Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5645Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
ACN38_g1593
Uncharacterized protein.
   
 0.772
ACN38_g8626
Reticulon-like protein.
    
  0.732
ACN38_g4872
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
    
 0.624
ACN38_g7923
Uncharacterized protein.
    
 0.602
ACN38_g4633
ANK_REP_REGION domain-containing protein.
    
 0.547
ACN38_g7946
Uncharacterized protein.
    
 0.488
ACN38_g58
Uncharacterized protein.
    
 0.488
ACN38_g5996
ECR1_N domain-containing protein.
    
 0.453
ACN38_g7993
RNase_PH domain-containing protein.
    
  0.449
ACN38_g958
Uncharacterized protein.
  
 
  0.446
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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