ACN38_g678 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g678

Uncharacterized protein. (317 aa)

Predicted Functional Partners:

ACN38_g3420

0.527

ACN38_g329

0.517

ACN38_g11467

0.501

ACN38_g3653

0.501

ACN38_g6224

0.472

ACN38_g6221

0.472

ACN38_g3033

0.472

ACN38_g9358

0.471

ACN38_g112

0.471

ACN38_g8958

0.434

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g112	ACN38_g3420	A0A0M9WL46	A0A0M8PC94	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.821
ACN38_g112	ACN38_g678	A0A0M9WL46	A0A0M8PA21	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.471
ACN38_g112	ACN38_g9358	A0A0M9WL46	A0A0M8P3R1	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.809
ACN38_g11467	ACN38_g678	A0A0M8NUU3	A0A0M8PA21	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.501
ACN38_g11467	ACN38_g8958	A0A0M8NUU3	A0A0M8P2V9	AB hydrolase-1 domain-containing protein.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.630
ACN38_g3033	ACN38_g6224	A0A0M9WIC9	A0A0M8P0X1	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	0.887
ACN38_g3033	ACN38_g678	A0A0M9WIC9	A0A0M8PA21	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	Uncharacterized protein.	0.472
ACN38_g329	ACN38_g678	A0A0M8PIZ2	A0A0M8PA21	Uncharacterized protein.	Uncharacterized protein.	0.517
ACN38_g3420	ACN38_g112	A0A0M8PC94	A0A0M9WL46	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	0.821
ACN38_g3420	ACN38_g678	A0A0M8PC94	A0A0M8PA21	Uncharacterized protein.	Uncharacterized protein.	0.527
ACN38_g3420	ACN38_g9358	A0A0M8PC94	A0A0M8P3R1	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.821
ACN38_g3653	ACN38_g678	A0A0M8P593	A0A0M8PA21	AB hydrolase-1 domain-containing protein.	Uncharacterized protein.	0.501
ACN38_g3653	ACN38_g8958	A0A0M8P593	A0A0M8P2V9	AB hydrolase-1 domain-containing protein.	Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.	0.630
ACN38_g6221	ACN38_g678	A0A0M8P0X7	A0A0M8PA21	Protein disulfide-isomerase.	Uncharacterized protein.	0.472
ACN38_g6224	ACN38_g3033	A0A0M8P0X1	A0A0M9WIC9	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	0.887
ACN38_g6224	ACN38_g678	A0A0M8P0X1	A0A0M8PA21	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	Uncharacterized protein.	0.472
ACN38_g678	ACN38_g112	A0A0M8PA21	A0A0M9WL46	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS3 family.	0.471
ACN38_g678	ACN38_g11467	A0A0M8PA21	A0A0M8NUU3	Uncharacterized protein.	AB hydrolase-1 domain-containing protein.	0.501
ACN38_g678	ACN38_g3033	A0A0M8PA21	A0A0M9WIC9	Uncharacterized protein.	Autophagy-related protein; Vacuolar effluxer which mediate the efflux of amino acids resulting from autophagic degradation. The release of autophagic amino acids allows the maintenance of protein synthesis and viability during nitrogen starvation; Belongs to the ATG22 family.	0.472
ACN38_g678	ACN38_g329	A0A0M8PA21	A0A0M8PIZ2	Uncharacterized protein.	Uncharacterized protein.	0.517