Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5581Uncharacterized protein. (533 aa)    
Predicted Functional Partners:
ACN38_g12453
Erf4 domain-containing protein.
    
 0.870
ACN38_g5103
E3 ubiquitin-protein ligase.
    
 0.754
ACN38_g7188
Uncharacterized protein.
    
 0.711
ACN38_g7690
C3H1-type domain-containing protein.
    
 0.695
ACN38_g12558
Serine/threonine-protein kinase.
    
 0.675
ACN38_g2096
Uncharacterized protein.
    
 0.662
benA
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.662
ACN38_g238
Uncharacterized protein.
   
 0.661
ACN38_g6152
HORMA domain-containing protein.
    
 0.654
ACN38_g3511
Protein kinase domain-containing protein.
    
 0.652
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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