Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5213Uncharacterized protein. (1533 aa)    
Predicted Functional Partners:
ACN38_g12076
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.943
ACN38_g1547
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.887
ACN38_g4640
Uncharacterized protein.
   
   0.881
ACN38_g9236
USP domain-containing protein.
   
 
 0.876
ACN38_g12670
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.874
ACN38_g9390
Ubiquitin carboxyl-terminal hydrolase.
    
 0.873
ACN38_g3459
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.861
ACN38_g5016
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.855
ACN38_g5017
Vezatin domain-containing protein.
   
 0.855
ACN38_g7689
Ribosomal_S10 domain-containing protein.
    
 
 0.854
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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