Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g5523Uncharacterized protein. (613 aa)    
Predicted Functional Partners:
ACN38_g4750
Uncharacterized protein.
   
 0.999
ACN38_g1724
B-block_TFIIIC domain-containing protein.
   
 0.999
ACN38_g10491
Uncharacterized protein.
  
 0.999
ACN38_g7527
SANT domain-containing protein.
    
 0.989
ACN38_g9324
Uncharacterized protein.
    
 0.968
ACN38_g12319
Uncharacterized protein.
    
 0.961
ACN38_g11001
Uncharacterized protein.
   
 
 0.938
ACN38_g11673
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.854
tbp1
TATA-box-binding protein.
    
 0.850
ACN38_g7333
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.849
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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