Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g297Uncharacterized protein. (745 aa)    
Predicted Functional Partners:
ACN38_g5648
But2 domain-containing protein.
    
  0.634
ACN38_g8103
Uncharacterized protein.
    
  0.634
ACN38_g5507
Zn(2)-C6 fungal-type domain-containing protein.
  
 
  0.588
ACN38_g423
GAR domain-containing protein.
  
 
  0.561
ACN38_g7465
Uncharacterized protein.
  
 
  0.552
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.506
ACN38_g2528
SANT domain-containing protein.
  
 
  0.502
ACN38_g6864
Uncharacterized protein.
  
     0.499
ACN38_g4022
WD_REPEATS_REGION domain-containing protein.
   
  0.491
ACN38_g2082
Uncharacterized protein.
  
 
  0.488
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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