Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g1823Uncharacterized protein. (343 aa)    
Predicted Functional Partners:
ACN38_g8443
Uncharacterized protein.
    
 0.997
ACN38_g5079
Uncharacterized protein.
    
 0.997
ACN38_g3840
TAF domain-containing protein.
    
 0.997
ACN38_g6019
TFIID_20kDa domain-containing protein.
   
 0.997
ACN38_g1169
Uncharacterized protein.
   
 0.997
ACN38_g1033
Uncharacterized protein.
   
 0.997
ACN38_g4562
TAFII55_N domain-containing protein.
    
 0.997
ACN38_g290
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.997
ACN38_g11869
DUF3591 domain-containing protein.
    
 0.996
tbp1
TATA-box-binding protein.
    
 0.991
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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