Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g62Uncharacterized protein. (359 aa)    
Predicted Functional Partners:
ACN38_g1709
WD_REPEATS_REGION domain-containing protein.
  
 0.987
ACN38_g12609
G protein gamma domain-containing protein.
   
 0.977
ACN38_g9568
Uncharacterized protein.
    
 0.975
ACN38_g593
Ubiquitin carboxyl-terminal hydrolase.
    
 0.975
ACN38_g1829
Uncharacterized protein.
   
 0.968
ACN38_g747
Uncharacterized protein.
   
 0.955
ACN38_g6840
Uncharacterized protein.
   
 0.894
mapk
Mitogen-activated protein kinase.
   
 0.894
rasA
Ras-like protein.
  
 0.839
ACN38_g8983
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.838
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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