Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g3675Uncharacterized protein. (203 aa)    
Predicted Functional Partners:
ACN38_g5978
Uncharacterized protein.
    
  0.802
ACN38_g5585
Fn3_like domain-containing protein.
     
  0.767
ACN38_g878
Uncharacterized protein.
     
  0.767
ACN38_g11515
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.766
ACN38_g5002
Aldo_ket_red domain-containing protein.
   
 
 0.733
ACN38_g4763
Uncharacterized protein.
  
 0.672
ACN38_g8282
AP_endonuc_2 domain-containing protein.
  
 
 0.670
ACN38_g10750
Uncharacterized protein.
   
 
 0.644
ACN38_g10016
Alpha-L-AF_C domain-containing protein.
    
  0.640
ACN38_g9292
NB-ARC domain-containing protein.
    
  0.640
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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