Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g3517Uncharacterized protein. (985 aa)    
Predicted Functional Partners:
ACN38_g8052
BP28CT domain-containing protein.
   
 
 0.993
ACN38_g11156
WD_REPEATS_REGION domain-containing protein.
   
 
 0.981
ACN38_g11858
WD_REPEATS_REGION domain-containing protein.
   
 
 0.970
ACN38_g724
KH domain-containing protein.
   
   0.969
ACN38_g6374
PUM-HD domain-containing protein.
   
   0.966
ACN38_g3590
Utp12 domain-containing protein.
   
 
 0.960
ACN38_g12447
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.958
ACN38_g666
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.951
ACN38_g3347
WD_REPEATS_REGION domain-containing protein.
   
 
 0.940
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.936
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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