Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g3524CULLIN_2 domain-containing protein; Belongs to the cullin family. (824 aa)    
Predicted Functional Partners:
ACN38_g5603
RING-type domain-containing protein.
    
 0.995
ACN38_g619
Uncharacterized protein.
    
 0.987
ACN38_g7168
Uncharacterized protein; Belongs to the SKP1 family.
   
 0.986
ACN38_g5244
Uncharacterized protein.
   
 0.985
ACN38_g7610
MPN domain-containing protein.
   
 0.979
ACN38_g1787
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 0.975
ACN38_g1824
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.972
ACN38_g8945
TIP120 domain-containing protein.
  
 0.969
ACN38_g5210
Uncharacterized protein.
    
 0.964
ACN38_g1510
UBX domain-containing protein.
   
 0.962
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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