ACN38_g1213 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g1213

Uncharacterized protein. (104 aa)

Predicted Functional Partners:

ACN38_g10532

0.852

ACN38_g10796

0.802

ACN38_g9575

0.769

ACN38_g5267

0.719

ACN38_g752

0.707

ACN38_g416

0.707

ACN38_g5792

0.695

ACN38_g621

0.684

ACN38_g2024

0.684

ACN38_g2751

0.681

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g10532	ACN38_g1213	A0A0M8P1E3	A0A0M8PC54	MHYT domain-containing protein.	Uncharacterized protein.	0.852
ACN38_g10532	ACN38_g2024	A0A0M8P1E3	A0A0M9WJ99	MHYT domain-containing protein.	Protein kinase domain-containing protein.	0.819
ACN38_g10532	ACN38_g2751	A0A0M8P1E3	A0A0M8PE28	MHYT domain-containing protein.	Fungal_trans domain-containing protein.	0.519
ACN38_g10532	ACN38_g416	A0A0M8P1E3	A0A0M8PH81	MHYT domain-containing protein.	Uncharacterized protein.	0.780
ACN38_g10532	ACN38_g621	A0A0M8P1E3	A0A0M8PAC4	MHYT domain-containing protein.	Uncharacterized protein.	0.819
ACN38_g10532	ACN38_g752	A0A0M8P1E3	A0A0M8PA06	MHYT domain-containing protein.	Uncharacterized protein.	0.780
ACN38_g10796	ACN38_g1213	A0A0M8NZU7	A0A0M8PC54	Uncharacterized protein.	Uncharacterized protein.	0.802
ACN38_g10796	ACN38_g2751	A0A0M8NZU7	A0A0M8PE28	Uncharacterized protein.	Fungal_trans domain-containing protein.	0.824
ACN38_g1213	ACN38_g10532	A0A0M8PC54	A0A0M8P1E3	Uncharacterized protein.	MHYT domain-containing protein.	0.852
ACN38_g1213	ACN38_g10796	A0A0M8PC54	A0A0M8NZU7	Uncharacterized protein.	Uncharacterized protein.	0.802
ACN38_g1213	ACN38_g2024	A0A0M8PC54	A0A0M9WJ99	Uncharacterized protein.	Protein kinase domain-containing protein.	0.684
ACN38_g1213	ACN38_g2751	A0A0M8PC54	A0A0M8PE28	Uncharacterized protein.	Fungal_trans domain-containing protein.	0.681
ACN38_g1213	ACN38_g416	A0A0M8PC54	A0A0M8PH81	Uncharacterized protein.	Uncharacterized protein.	0.707
ACN38_g1213	ACN38_g5267	A0A0M8PC54	A0A0M8P2I6	Uncharacterized protein.	Uncharacterized protein.	0.719
ACN38_g1213	ACN38_g5792	A0A0M8PC54	A0A0M8P116	Uncharacterized protein.	Uncharacterized protein.	0.695
ACN38_g1213	ACN38_g621	A0A0M8PC54	A0A0M8PAC4	Uncharacterized protein.	Uncharacterized protein.	0.684
ACN38_g1213	ACN38_g752	A0A0M8PC54	A0A0M8PA06	Uncharacterized protein.	Uncharacterized protein.	0.707
ACN38_g1213	ACN38_g9575	A0A0M8PC54	A0A0M8P2X5	Uncharacterized protein.	Uncharacterized protein.	0.769
ACN38_g2024	ACN38_g10532	A0A0M9WJ99	A0A0M8P1E3	Protein kinase domain-containing protein.	MHYT domain-containing protein.	0.819
ACN38_g2024	ACN38_g1213	A0A0M9WJ99	A0A0M8PC54	Protein kinase domain-containing protein.	Uncharacterized protein.	0.684