Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g3463Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (997 aa)    
Predicted Functional Partners:
ACN38_g10223
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.935
ACN38_g2921
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.935
ACN38_g10394
Uncharacterized protein.
  
 0.931
ACN38_g5201
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.926
ACN38_g5758
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.920
ACN38_g5860
AA_TRNA_LIGASE_II domain-containing protein.
  
 0.920
ACN38_g7333
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.912
ACN38_g5492
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.911
ACN38_g10133
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.902
ACN38_g7616
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.902
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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