ACN38_g1075 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g1075

Uncharacterized protein. (201 aa)

Predicted Functional Partners:

ACN38_g1076

0.852

ACN38_g2684

0.805

ACN38_g9622

0.805

ACN38_g4475

0.776

ACN38_g3597

0.776

ACN38_g9199

0.767

ACN38_g8310

0.767

ACN38_g1079

0.767

ACN38_g11247

0.765

MET3

0.749

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g1075	ACN38_g1076	A0A0M8PC84	A0A0M8P9J7	Uncharacterized protein.	Uncharacterized protein.	0.852
ACN38_g1075	ACN38_g1079	A0A0M8PC84	A0A0N0RZY9	Uncharacterized protein.	Amidase domain-containing protein.	0.767
ACN38_g1075	ACN38_g11247	A0A0M8PC84	A0A0M8NZ44	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.765
ACN38_g1075	ACN38_g2684	A0A0M8PC84	A0A0M8P9L0	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.805
ACN38_g1075	ACN38_g3597	A0A0M8PC84	A0A0M8PBY3	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.776
ACN38_g1075	ACN38_g4475	A0A0M8PC84	A0A0M8PBX6	Uncharacterized protein.	Amidase domain-containing protein.	0.776
ACN38_g1075	ACN38_g8310	A0A0M8PC84	A0A0N0RYB5	Uncharacterized protein.	Amidase domain-containing protein.	0.767
ACN38_g1075	ACN38_g9199	A0A0M8PC84	A0A0M8NUY7	Uncharacterized protein.	Amidase domain-containing protein.	0.767
ACN38_g1075	ACN38_g9622	A0A0M8PC84	A0A0N0RY07	Uncharacterized protein.	Uncharacterized protein.	0.805
ACN38_g1075	MET3	A0A0M8PC84	A0A0M8P368	Uncharacterized protein.	Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family.	0.749
ACN38_g1076	ACN38_g1075	A0A0M8P9J7	A0A0M8PC84	Uncharacterized protein.	Uncharacterized protein.	0.852
ACN38_g1076	ACN38_g1079	A0A0M8P9J7	A0A0N0RZY9	Uncharacterized protein.	Amidase domain-containing protein.	0.767
ACN38_g1076	ACN38_g11247	A0A0M8P9J7	A0A0M8NZ44	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.765
ACN38_g1076	ACN38_g2684	A0A0M8P9J7	A0A0M8P9L0	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.805
ACN38_g1076	ACN38_g3597	A0A0M8P9J7	A0A0M8PBY3	Uncharacterized protein.	4-hydroxyphenylpyruvate dioxygenase.	0.776
ACN38_g1076	ACN38_g4475	A0A0M8P9J7	A0A0M8PBX6	Uncharacterized protein.	Amidase domain-containing protein.	0.776
ACN38_g1076	ACN38_g8310	A0A0M8P9J7	A0A0N0RYB5	Uncharacterized protein.	Amidase domain-containing protein.	0.767
ACN38_g1076	ACN38_g9199	A0A0M8P9J7	A0A0M8NUY7	Uncharacterized protein.	Amidase domain-containing protein.	0.767
ACN38_g1076	ACN38_g9622	A0A0M8P9J7	A0A0N0RY07	Uncharacterized protein.	Uncharacterized protein.	0.805
ACN38_g1076	MET3	A0A0M8P9J7	A0A0M8P368	Uncharacterized protein.	Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family.	0.749