Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g4224Uncharacterized protein. (1326 aa)    
Predicted Functional Partners:
ACN38_g9443
Uncharacterized protein.
   
 0.994
ACN38_g2409
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
  
 0.993
ACN38_g8480
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.990
ACN38_g11887
Peptidase S59 domain-containing protein.
   
 0.987
ACN38_g12373
Nup188_C domain-containing protein.
  
 0.968
ACN38_g3973
Uncharacterized protein.
    
 0.947
ACN38_g9985
Nup54 domain-containing protein.
    
 0.938
ACN38_g7264
Uncharacterized protein.
   
 0.937
ACN38_g6253
TPR_MLP1_2 domain-containing protein.
    
 0.928
ACN38_g5986
Uncharacterized protein.
    
 0.927
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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