Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g923Uncharacterized protein. (225 aa)    
Predicted Functional Partners:
ACN38_g9799
Uncharacterized protein.
   
 
 0.872
ACN38_g6792
Protein kinase domain-containing protein.
   
   0.844
ACN38_g1416
G-patch domain-containing protein.
   
   0.810
ACN38_g4655
Cyclin N-terminal domain-containing protein.
    
   0.804
ACN38_g921
Proteasome subunit beta; Belongs to the peptidase T1B family.
 
 
    0.776
ACN38_g10168
Matrin-type domain-containing protein.
   
   0.644
ACN38_g760
WD_REPEATS_REGION domain-containing protein.
   
   0.587
ACN38_g5437
Dynactin domain-containing protein.
    
   0.586
ACN38_g3424
Uncharacterized protein.
   
   0.580
ACN38_g7147
ARID domain-containing protein.
    
 0.555
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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