Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g3187Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family. (447 aa)    
Predicted Functional Partners:
ACN38_g8492
Uncharacterized protein.
    
 0.688
ACN38_g9648
Amb_all domain-containing protein.
    
 
 0.682
ACN38_g8175
Amb_all domain-containing protein.
    
 
 0.673
ACN38_g275
Uncharacterized protein.
    
 0.624
ACN38_g5978
Uncharacterized protein.
     
 0.596
ACN38_g10580
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
    
  0.560
ACN38_g1951
Uncharacterized protein.
    
  0.556
ACN38_g10942
Ubiquitin-like domain-containing protein.
    
  0.539
ACN38_g10943
RRN7-type domain-containing protein.
    
  0.539
ACN38_g7403
Uncharacterized protein.
    
  0.532
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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