Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g3128PKS_ER domain-containing protein. (387 aa)    
Predicted Functional Partners:
ACN38_g11598
Aldo_ket_red domain-containing protein.
   
 0.846
ACN38_g6106
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.841
ACN38_g8635
Uncharacterized protein.
   
 
 0.815
ACN38_g3407
Uncharacterized protein.
  
 
 0.791
ACN38_g12084
Phosphotransferase.
   
 
 0.777
ACN38_g11404
Uncharacterized protein.
    
 0.776
ACN38_g12397
PfkB domain-containing protein.
   
 
 0.757
ACN38_g8634
Uncharacterized protein.
   
 
 0.749
ACN38_g4998
Uncharacterized protein.
   
 
 0.749
ACN38_g9593
PKS_ER domain-containing protein.
  
  
 
0.661
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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