Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACN38_g555AMP-binding domain-containing protein. (117 aa)    
Predicted Functional Partners:
ACN38_g11432
PALP domain-containing protein.
   
 
 0.778
ACN38_g7114
Tryptophan synthase.
   
 
 0.778
ACN38_g11488
Tryptophan synthase.
   
 
 0.778
ACN38_g10638
ACPS domain-containing protein.
  
 0.778
ACN38_g1162
Histidine biosynthesis trifunctional protein.
   
  
 0.763
ACN38_g12914
Uncharacterized protein.
  
 
 0.659
ACN38_g2456
Uncharacterized protein.
  
 
 0.659
ACN38_g5665
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.626
ACN38_g12718
PABS domain-containing protein; Belongs to the spermidine/spermine synthase family.
     
  0.610
ACN38_g7654
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
  
 
 0.503
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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