Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g27314HBT domain-containing protein. (291 aa)    
Predicted Functional Partners:
ACN38_g4416
Uncharacterized protein.
     
 0.661
ACN38_g3612
S5A_REDUCTASE domain-containing protein.
     
  0.656
ACN38_g3443
4HBT domain-containing protein.
     
  0.606
ACN38_g2126
PUM-HD domain-containing protein.
    
   0.589
ACN38_g8952
Uncharacterized protein.
     
  0.485
ACN38_g5866
Uncharacterized protein.
     
  0.485
ACN38_g5867
LRRcap domain-containing protein.
     
  0.485
ACN38_g7954
Lactamase_B domain-containing protein.
     
  0.483
ACN38_g3167
Lactamase_B domain-containing protein.
     
  0.483
ACN38_g5548
Lactamase_B domain-containing protein.
     
  0.483
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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