Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g404Uncharacterized protein. (355 aa)    
Predicted Functional Partners:
ACN38_g10661
Uncharacterized protein.
   
 
 0.980
ACN38_g897
PRA1 family protein.
   
 
 0.936
ACN38_g896
Uncharacterized protein.
   
 
 0.936
ACN38_g12368
ER lumen protein-retaining receptor.
   
 
 0.926
ACN38_g5337
Uncharacterized protein.
    
 
 0.908
ACN38_g6555
Uncharacterized protein.
   
 
 0.846
ACN38_g4840
GOLD domain-containing protein.
   
 
 0.838
ACN38_g3851
Protein YOP1.
    
 
 0.782
ACN38_g4877
Uncharacterized protein.
    
 
 0.754
ACN38_g10941
Protein YIP.
   
  
 0.743
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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