STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN38_g7210Uncharacterized protein. (580 aa)    
Predicted Functional Partners:
trpC
Multifunctional tryptophan biosynthesis protein.
    
 
 0.630
ACN38_g7338
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
    
 0.582
ACN38_g12619
Uncharacterized protein.
    
 0.564
ACN38_g5163
Uncharacterized protein.
    
 0.564
ACN38_g7078
Uncharacterized protein.
    
 0.564
ACN38_g6180
Uncharacterized protein.
    
 0.564
ACN38_g2088
Aamy domain-containing protein.
    
 0.564
ACN38_g92
Uncharacterized protein.
    
 0.564
ACN38_g93
Uncharacterized protein.
    
 0.564
ACN38_g1818
Fe2OG dioxygenase domain-containing protein.
    
 0.564
Your Current Organism:
Penicillium nordicum
NCBI taxonomy Id: 229535
Other names: P. nordicum
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