ACN38_g6909 protein (Penicillium nordicum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ACN38_g6909

Uncharacterized protein. (1197 aa)

Predicted Functional Partners:

ACN38_g10223

0.955

ACN38_g2921

0.955

ACN38_g5201

0.947

ACN38_g5492

0.930

ACN38_g10394

0.921

ACN38_g7429

0.915

ACN38_g119

0.887

ACN38_g10133

0.875

ACN38_g5540

0.875

ACN38_g7616

0.875

Your Current Organism:

Penicillium nordicum

NCBI taxonomy Id: 229535
Other names: P. nordicum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN38_g10133	ACN38_g10223	A0A0M8NTE9	A0A0M8P1W4	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.991
ACN38_g10133	ACN38_g10394	A0A0M8NTE9	A0A0M8P0I1	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.978
ACN38_g10133	ACN38_g119	A0A0M8NTE9	A0A0M9WL35	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	B5 domain-containing protein.	0.604
ACN38_g10133	ACN38_g2921	A0A0M8NTE9	A0A0M8PDU6	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	AA_TRNA_LIGASE_II domain-containing protein.	0.934
ACN38_g10133	ACN38_g5201	A0A0M8NTE9	A0A0M9WGF1	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.930
ACN38_g10133	ACN38_g5492	A0A0M8NTE9	A0A0M8P9R0	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.727
ACN38_g10133	ACN38_g5540	A0A0M8NTE9	A0A0M8P1H9	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.978
ACN38_g10133	ACN38_g6909	A0A0M8NTE9	A0A0N0RYM7	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein.	0.875
ACN38_g10133	ACN38_g7429	A0A0M8NTE9	A0A0M8NY91	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.891
ACN38_g10133	ACN38_g7616	A0A0M8NTE9	A0A0M9WEB2	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.463
ACN38_g10223	ACN38_g10133	A0A0M8P1W4	A0A0M8NTE9	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.991
ACN38_g10223	ACN38_g10394	A0A0M8P1W4	A0A0M8P0I1	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein.	0.980
ACN38_g10223	ACN38_g119	A0A0M8P1W4	A0A0M9WL35	AA_TRNA_LIGASE_II domain-containing protein.	B5 domain-containing protein.	0.775
ACN38_g10223	ACN38_g2921	A0A0M8P1W4	A0A0M8PDU6	AA_TRNA_LIGASE_II domain-containing protein.	AA_TRNA_LIGASE_II domain-containing protein.	0.948
ACN38_g10223	ACN38_g5201	A0A0M8P1W4	A0A0M9WGF1	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.974
ACN38_g10223	ACN38_g5492	A0A0M8P1W4	A0A0M8P9R0	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.764
ACN38_g10223	ACN38_g5540	A0A0M8P1W4	A0A0M8P1H9	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.996
ACN38_g10223	ACN38_g6909	A0A0M8P1W4	A0A0N0RYM7	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein.	0.955
ACN38_g10223	ACN38_g7429	A0A0M8P1W4	A0A0M8NY91	AA_TRNA_LIGASE_II domain-containing protein.	Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.912
ACN38_g10223	ACN38_g7616	A0A0M8P1W4	A0A0M9WEB2	AA_TRNA_LIGASE_II domain-containing protein.	tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.955