Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DEQ80_01665 | DEQ80_11995 | GCA_001050195_03016 | GCA_001050195_02669 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.427 |
DEQ80_01665 | GCA_001050195_01600 | GCA_001050195_03016 | GCA_001050195_01600 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.662 |
DEQ80_01665 | serC | GCA_001050195_03016 | GCA_001050195_00053 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.948 |
DEQ80_03840 | DEQ80_10765 | GCA_001050195_03230 | GCA_001050195_00134 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.826 |
DEQ80_03840 | DEQ80_11995 | GCA_001050195_03230 | GCA_001050195_02669 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.427 |
DEQ80_03840 | GCA_001050195_01600 | GCA_001050195_03230 | GCA_001050195_01600 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.662 |
DEQ80_03840 | serC | GCA_001050195_03230 | GCA_001050195_00053 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.968 |
DEQ80_06850 | DEQ80_11995 | GCA_001050195_01760 | GCA_001050195_02669 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.427 |
DEQ80_06850 | GCA_001050195_01600 | GCA_001050195_01760 | GCA_001050195_01600 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein. | 0.662 |
DEQ80_06850 | serC | GCA_001050195_01760 | GCA_001050195_00053 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.889 |
DEQ80_07620 | DEQ80_11995 | GCA_001050195_03474 | GCA_001050195_02669 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein. | 0.443 |
DEQ80_07620 | GCA_001050195_01522 | GCA_001050195_03474 | GCA_001050195_01522 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein. | 0.837 |
DEQ80_07620 | serC | GCA_001050195_03474 | GCA_001050195_00053 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.879 |
DEQ80_07620 | thrC | GCA_001050195_03474 | GCA_001050195_02667 | Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | Unannotated protein. | 0.809 |
DEQ80_08770 | DEQ80_11995 | GCA_001050195_02554 | GCA_001050195_02669 | Unannotated protein. | Unannotated protein. | 0.427 |
DEQ80_08770 | GCA_001050195_01522 | GCA_001050195_02554 | GCA_001050195_01522 | Unannotated protein. | Unannotated protein. | 0.421 |
DEQ80_08770 | GCA_001050195_01600 | GCA_001050195_02554 | GCA_001050195_01600 | Unannotated protein. | Unannotated protein. | 0.662 |
DEQ80_08770 | serC | GCA_001050195_02554 | GCA_001050195_00053 | Unannotated protein. | Unannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.889 |
DEQ80_08770 | thrC | GCA_001050195_02554 | GCA_001050195_02667 | Unannotated protein. | Unannotated protein. | 0.406 |
DEQ80_10765 | DEQ80_03840 | GCA_001050195_00134 | GCA_001050195_03230 | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.826 |
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