STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEQ80_10280Unannotated protein. (191 aa)    
Predicted Functional Partners:
DEQ80_01060
Unannotated protein.
   
 
  0.813
DEQ80_07905
Unannotated protein.
   
 
  0.800
GCA_001050195_01423
Unannotated protein.
   
 
  0.760
DEQ80_10275
Unannotated protein.
  
 
  0.689
DEQ80_08055
Unannotated protein.
 
 
  0.581
DEQ80_05945
Unannotated protein.
  
     0.574
GCA_001050195_01436
Unannotated protein.
  
    0.544
DEQ80_10160
Unannotated protein.
  
     0.536
DEQ80_12230
Unannotated protein.
  
 
 0.536
msrP
Unannotated protein; Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide.
  
 
 0.517
Your Current Organism:
Anaerolinea thermolimosa
NCBI taxonomy Id: 229919
Other names: A. thermolimosa, Anaerolinea thermolimosa Yamada et al. 2006, DSM 16554, JCM 12577, anaerobic filamentous bacterium IMO-1, strain IMO-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.